PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_160720_jzkt.t2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family HD-ZIP
Protein Properties Length: 180aa    MW: 21055.9 Da    PI: 9.5458
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_160720_jzkt.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox665e-211872256
                        T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
            Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                        + ++++t++qle Le+ F+++r+++ +++ +LA++lgL+ rqV vWFqNrRa++k
  Bv7_160720_jzkt.t2 18 KMKRRLTTNQLESLESSFQEERKLDPDRKMKLARELGLQPRQVAVWFQNRRARWK 72
                        567899************************************************9 PP

2HD-ZIP_I/II115.33.6e-3719109292
         HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                          krrl+++q+++LE+sF+ee+kL+p+rK++lareLglqprqvavWFqnrRAR+k+k+lE  y+aLk +++++++e+++L++ev +L++ l+
  Bv7_160720_jzkt.t2  19 MKRRLTTNQLESLESSFQEERKLDPDRKMKLARELGLQPRQVAVWFQNRRARWKAKKLEYLYDALKLEFENVSKEKQKLQDEVLKLKSMLM 109
                         59*************************************************************************************9886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.45E-20875IPR009057Homeodomain-like
PROSITE profilePS5007118.561474IPR001356Homeobox domain
SMARTSM003892.1E-181678IPR001356Homeobox domain
CDDcd000863.46E-161875No hitNo description
PfamPF000462.4E-181872IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.3E-222180IPR009057Homeodomain-like
PRINTSPR000314.2E-64554IPR000047Helix-turn-helix motif
PROSITE patternPS0002704972IPR017970Homeobox, conserved site
PRINTSPR000314.2E-65470IPR000047Helix-turn-helix motif
PfamPF021838.6E-779108IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0010434Biological Processbract formation
GO:0010582Biological Processfloral meristem determinacy
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048510Biological Processregulation of timing of transition from vegetative to reproductive phase
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MGMGRDMIMM SFGNNQEKMK RRLTTNQLES LESSFQEERK LDPDRKMKLA RELGLQPRQV  60
AVWFQNRRAR WKAKKLEYLY DALKLEFENV SKEKQKLQDE VLKLKSMLMQ QATKKQVYNY  120
TEASCEETVE STSVAIPNSD HHKNASQAVF SRGHNNKEGH HLFNVDDYNA VSPCYWGAFA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00486DAPTransfer from AT5G03790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010683925.11e-135PREDICTED: putative homeobox-leucine zipper protein ATHB-51
SwissprotQ9LZR08e-44ATB51_ARATH; Putative homeobox-leucine zipper protein ATHB-51
TrEMBLA0A0J8C2551e-135A0A0J8C255_BETVU; Uncharacterized protein
TrEMBLA0A0J8C2N91e-134A0A0J8C2N9_BETVU; Uncharacterized protein
STRINGVIT_08s0007g04200.t011e-62(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.12e-36homeobox 51